Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.82■□□□□ 0.6
NFX1Q12986 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFX1Q12986 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NFX1Q12986 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFX1Q12986 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFX1Q12986 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NFX1Q12986 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 AL513480.1-201ENST00000451731 511 ntBASIC18.81■□□□□ 0.6
NFX1Q12986 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.81■□□□□ 0.6
NFX1Q12986 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NFX1Q12986 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.81■□□□□ 0.6
NFX1Q12986 AC091812.2-201ENST00000619081 385 ntBASIC18.81■□□□□ 0.6
NFX1Q12986 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.81■□□□□ 0.6
NFX1Q12986 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFX1Q12986 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFX1Q12986 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NFX1Q12986 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
NFX1Q12986 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NFX1Q12986 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NFX1Q12986 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NFX1Q12986 FAM185BP-201ENST00000443595 716 ntBASIC18.8■□□□□ 0.6
NFX1Q12986 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.8■□□□□ 0.6
NFX1Q12986 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.8■□□□□ 0.6
NFX1Q12986 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NFX1Q12986 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NFX1Q12986 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.8■□□□□ 0.6
NFX1Q12986 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.8■□□□□ 0.6
NFX1Q12986 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.8■□□□□ 0.6
NFX1Q12986 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NFX1Q12986 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.8■□□□□ 0.6
NFX1Q12986 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFX1Q12986 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NFX1Q12986 FZD10-202ENST00000539839 3282 ntBASIC18.8■□□□□ 0.6
NFX1Q12986 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
NFX1Q12986 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NFX1Q12986 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.79■□□□□ 0.6
NFX1Q12986 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.79■□□□□ 0.6
NFX1Q12986 PAWRP1-201ENST00000451083 565 ntBASIC18.79■□□□□ 0.6
NFX1Q12986 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.79■□□□□ 0.6
NFX1Q12986 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 PKD1P1-201ENST00000458669 6805 ntBASIC18.79■□□□□ 0.6
NFX1Q12986 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.79■□□□□ 0.6
NFX1Q12986 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.79■□□□□ 0.6
NFX1Q12986 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NFX1Q12986 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFX1Q12986 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFX1Q12986 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.78■□□□□ 0.6
NFX1Q12986 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFX1Q12986 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms