Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 AL591424.1-201ENST00000442569 1213 ntBASIC17.22■□□□□ 0.35
AP1S1P61966 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP1S1P61966 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.21■□□□□ 0.35
AP1S1P61966 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 AL021920.2-201ENST00000624828 1351 ntBASIC17.21■□□□□ 0.35
AP1S1P61966 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.21■□□□□ 0.35
AP1S1P61966 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.21■□□□□ 0.35
AP1S1P61966 DUX4L17-201ENST00000557360 1267 ntBASIC17.21■□□□□ 0.35
AP1S1P61966 OR7E47P-204ENST00000575924 449 ntBASIC17.21■□□□□ 0.35
AP1S1P61966 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 AC027601.4-201ENST00000611259 610 ntBASIC17.21■□□□□ 0.35
AP1S1P61966 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S1P61966 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.21■□□□□ 0.35
AP1S1P61966 AC092053.1-201ENST00000605787 1936 ntBASIC17.21■□□□□ 0.35
AP1S1P61966 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S1P61966 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
AP1S1P61966 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP1S1P61966 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP1S1P61966 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S1P61966 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AP1S1P61966 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.2■□□□□ 0.34
AP1S1P61966 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.2■□□□□ 0.34
AP1S1P61966 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.2■□□□□ 0.34
AP1S1P61966 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S1P61966 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
AP1S1P61966 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S1P61966 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
AP1S1P61966 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.2■□□□□ 0.34
AP1S1P61966 TUBB8P12-201ENST00000308911 1335 ntBASIC17.2■□□□□ 0.34
AP1S1P61966 TUBB7P-202ENST00000428444 1305 ntBASIC17.2■□□□□ 0.34
AP1S1P61966 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S1P61966 TUBB8P7-204ENST00000567960 1332 ntBASIC17.2■□□□□ 0.34
AP1S1P61966 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 AP001094.4-201ENST00000579008 2176 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 PKD1P1-201ENST00000458669 6805 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
AP1S1P61966 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms