Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP3S2P59780 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
AP3S2P59780 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.77□□□□□ -0.04
AP3S2P59780 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AP3S2P59780 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.77□□□□□ -0.05
AP3S2P59780 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
AP3S2P59780 AF186192.3-201ENST00000583427 947 ntBASIC14.77□□□□□ -0.05
AP3S2P59780 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.77□□□□□ -0.05
AP3S2P59780 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
AP3S2P59780 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.77□□□□□ -0.05
AP3S2P59780 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
AP3S2P59780 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
AP3S2P59780 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 AC092364.2-201ENST00000596710 2692 ntBASIC14.77□□□□□ -0.05
AP3S2P59780 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
AP3S2P59780 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.77□□□□□ -0.05
AP3S2P59780 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP3S2P59780 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
AP3S2P59780 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.76□□□□□ -0.05
AP3S2P59780 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 AC026366.1-201ENST00000488803 879 ntBASIC14.76□□□□□ -0.05
AP3S2P59780 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.76□□□□□ -0.05
AP3S2P59780 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.76□□□□□ -0.05
AP3S2P59780 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.76□□□□□ -0.05
AP3S2P59780 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S2P59780 HLA-A-202ENST00000376806 1854 ntBASIC14.76□□□□□ -0.05
AP3S2P59780 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.76□□□□□ -0.05
AP3S2P59780 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S2P59780 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
AP3S2P59780 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP3S2P59780 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
AP3S2P59780 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
AP3S2P59780 AC097488.1-201ENST00000507834 756 ntBASIC14.75□□□□□ -0.05
AP3S2P59780 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.75□□□□□ -0.05
AP3S2P59780 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
AP3S2P59780 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
AP3S2P59780 MIR5787-201ENST00000611784 55 ntBASIC14.75□□□□□ -0.05
AP3S2P59780 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP3S2P59780 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S2P59780 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms