Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.85■□□□□ 0.29
GTF2A1P52655 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GTF2A1P52655 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GTF2A1P52655 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.85■□□□□ 0.29
GTF2A1P52655 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.84■□□□□ 0.29
GTF2A1P52655 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.84■□□□□ 0.29
GTF2A1P52655 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 BX276092.2-201ENST00000417668 665 ntBASIC16.84■□□□□ 0.29
GTF2A1P52655 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.84■□□□□ 0.29
GTF2A1P52655 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.84■□□□□ 0.29
GTF2A1P52655 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.84■□□□□ 0.29
GTF2A1P52655 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GTF2A1P52655 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 LINC00528-201ENST00000600723 2160 ntBASIC16.84■□□□□ 0.29
GTF2A1P52655 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
GTF2A1P52655 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.84■□□□□ 0.29
GTF2A1P52655 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.83■□□□□ 0.29
GTF2A1P52655 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
GTF2A1P52655 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GTF2A1P52655 ST20-AS1-201ENST00000560255 4223 ntBASIC16.83■□□□□ 0.29
GTF2A1P52655 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GTF2A1P52655 OR2I1P-209ENST00000641730 5365 ntBASIC16.83■□□□□ 0.29
GTF2A1P52655 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GTF2A1P52655 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.83■□□□□ 0.28
GTF2A1P52655 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 YBX1P10-201ENST00000444752 975 ntBASIC16.83■□□□□ 0.28
GTF2A1P52655 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.83■□□□□ 0.28
GTF2A1P52655 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.83■□□□□ 0.28
GTF2A1P52655 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 AC133552.2-202ENST00000575694 574 ntBASIC16.83■□□□□ 0.28
GTF2A1P52655 AC010327.5-201ENST00000586923 3061 ntBASIC16.83■□□□□ 0.28
GTF2A1P52655 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.83■□□□□ 0.28
GTF2A1P52655 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GTF2A1P52655 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.83■□□□□ 0.28
GTF2A1P52655 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.83■□□□□ 0.28
GTF2A1P52655 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GTF2A1P52655 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.82■□□□□ 0.28
GTF2A1P52655 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms