Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT9P35527 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT9P35527 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT9P35527 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
KRT9P35527 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT9P35527 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT9P35527 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT9P35527 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 AP002383.4-201ENST00000442518 975 ntBASIC18.77■□□□□ 0.6
KRT9P35527 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT9P35527 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
KRT9P35527 AP002414.4-201ENST00000589764 1148 ntBASIC18.77■□□□□ 0.6
KRT9P35527 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT9P35527 Z69720.1-201ENST00000601483 472 ntBASIC18.77■□□□□ 0.6
KRT9P35527 AC069148.1-201ENST00000608741 768 ntBASIC18.77■□□□□ 0.6
KRT9P35527 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT9P35527 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT9P35527 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT9P35527 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT9P35527 AC233702.3-201ENST00000578656 1387 ntBASIC18.77■□□□□ 0.6
KRT9P35527 AC008894.3-201ENST00000624324 3103 ntBASIC18.77■□□□□ 0.6
KRT9P35527 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT9P35527 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.77■□□□□ 0.59
KRT9P35527 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KRT9P35527 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT9P35527 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT9P35527 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT9P35527 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
KRT9P35527 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT9P35527 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT9P35527 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT9P35527 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 DRAXINP1-201ENST00000437611 948 ntBASIC18.76■□□□□ 0.59
KRT9P35527 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 AC091607.1-201ENST00000490318 1060 ntBASIC18.76■□□□□ 0.59
KRT9P35527 AC122714.2-201ENST00000502787 707 ntBASIC18.76■□□□□ 0.59
KRT9P35527 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.76■□□□□ 0.59
KRT9P35527 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT9P35527 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT9P35527 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
KRT9P35527 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT9P35527 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT9P35527 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT9P35527 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.75■□□□□ 0.59
KRT9P35527 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT9P35527 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT9P35527 AC009533.2-201ENST00000543664 586 ntBASIC18.75■□□□□ 0.59
KRT9P35527 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT9P35527 TPSP2-201ENST00000561760 610 ntBASIC18.75■□□□□ 0.59
KRT9P35527 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.75■□□□□ 0.59
KRT9P35527 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRT9P35527 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms