Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPNS1P04632 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.07■□□□□ 0.32
CAPNS1P04632 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPNS1P04632 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPNS1P04632 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPNS1P04632 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 AC073621.1-201ENST00000392730 636 ntBASIC17.06■□□□□ 0.32
CAPNS1P04632 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.06■□□□□ 0.32
CAPNS1P04632 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.06■□□□□ 0.32
CAPNS1P04632 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 AC133963.1-201ENST00000504166 1679 ntBASIC17.06■□□□□ 0.32
CAPNS1P04632 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CAPNS1P04632 AC011270.2-201ENST00000624293 2550 ntBASIC17.06■□□□□ 0.32
CAPNS1P04632 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPNS1P04632 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPNS1P04632 ELL2P1-201ENST00000413990 1906 ntBASIC17.06■□□□□ 0.32
CAPNS1P04632 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPNS1P04632 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 UBALD1-205ENST00000590891 2641 ntBASIC17.05■□□□□ 0.32
CAPNS1P04632 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPNS1P04632 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CAPNS1P04632 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 AL139400.1-201ENST00000366220 510 ntBASIC17.05■□□□□ 0.32
CAPNS1P04632 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPNS1P04632 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPNS1P04632 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPNS1P04632 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPNS1P04632 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms