Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KRT8P23-201ENST00000560090 1207 ntBASIC19.92■□□□□ 0.78
CTNND1O60716 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 AJ011932.1-201ENST00000621707 465 ntBASIC19.92■□□□□ 0.78
CTNND1O60716 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
CTNND1O60716 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 AL355312.1-201ENST00000407115 2176 ntBASIC19.91■□□□□ 0.78
CTNND1O60716 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNND1O60716 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CTNND1O60716 LTB4R2-202ENST00000528054 3092 ntBASIC19.91■□□□□ 0.78
CTNND1O60716 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNND1O60716 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNND1O60716 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNND1O60716 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.91■□□□□ 0.78
CTNND1O60716 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.91■□□□□ 0.78
CTNND1O60716 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNND1O60716 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNND1O60716 MIR4745-201ENST00000577608 62 ntBASIC19.91■□□□□ 0.78
CTNND1O60716 AC084121.4-201ENST00000641598 221 ntBASIC19.91■□□□□ 0.78
CTNND1O60716 AF228730.8-201ENST00000642140 221 ntBASIC19.91■□□□□ 0.78
CTNND1O60716 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.91■□□□□ 0.78
CTNND1O60716 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.91■□□□□ 0.78
CTNND1O60716 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.91■□□□□ 0.78
CTNND1O60716 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTNND1O60716 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.9■□□□□ 0.78
CTNND1O60716 HCG4-201ENST00000418983 998 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.9■□□□□ 0.78
CTNND1O60716 AC055876.3-201ENST00000431496 288 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 RBPMS2P1-201ENST00000437762 623 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.9■□□□□ 0.78
CTNND1O60716 IGHV3-62-201ENST00000520057 340 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.9■□□□□ 0.78
CTNND1O60716 AC138649.4-201ENST00000612222 287 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNND1O60716 TUBB3P1-201ENST00000405796 1332 ntBASIC19.9■□□□□ 0.78
CTNND1O60716 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNND1O60716 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNND1O60716 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
CTNND1O60716 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.9■□□□□ 0.78
CTNND1O60716 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CTNND1O60716 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTNND1O60716 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTNND1O60716 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.78
CTNND1O60716 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CTNND1O60716 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.89■□□□□ 0.77
CTNND1O60716 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.89■□□□□ 0.77
CTNND1O60716 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 AC093214.1-201ENST00000511688 1107 ntBASIC19.89■□□□□ 0.77
CTNND1O60716 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CTNND1O60716 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.89■□□□□ 0.77
CTNND1O60716 AC138761.1-201ENST00000584393 385 ntBASIC19.89■□□□□ 0.77
CTNND1O60716 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTNND1O60716 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms