Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC188H7C350 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC188H7C350 ATP5G1P1-201ENST00000448724 379 ntBASIC17.84■□□□□ 0.45
CCDC188H7C350 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 AC010203.1-204ENST00000548782 407 ntBASIC17.84■□□□□ 0.45
CCDC188H7C350 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC188H7C350 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC188H7C350 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC188H7C350 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC188H7C350 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC188H7C350 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC188H7C350 MTHFR-217ENST00000641820 1569 ntBASIC17.83■□□□□ 0.45
CCDC188H7C350 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CCDC188H7C350 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC188H7C350 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC188H7C350 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC188H7C350 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC188H7C350 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC188H7C350 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC188H7C350 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC188H7C350 AC092364.2-201ENST00000596710 2692 ntBASIC17.83■□□□□ 0.44
CCDC188H7C350 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC188H7C350 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCDC188H7C350 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC188H7C350 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC188H7C350 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC188H7C350 GUSBP12-201ENST00000513727 720 ntBASIC17.83■□□□□ 0.44
CCDC188H7C350 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CCDC188H7C350 RNF126P1-202ENST00000569893 925 ntBASIC17.83■□□□□ 0.44
CCDC188H7C350 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC188H7C350 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC188H7C350 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC188H7C350 AL353801.3-201ENST00000609898 542 ntBASIC17.83■□□□□ 0.44
CCDC188H7C350 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC188H7C350 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC188H7C350 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC188H7C350 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC188H7C350 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC188H7C350 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.82■□□□□ 0.44
CCDC188H7C350 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 YBX1P2-201ENST00000489612 999 ntBASIC17.82■□□□□ 0.44
CCDC188H7C350 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC188H7C350 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
CCDC188H7C350 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms