Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RCCD1A6NED2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.23■□□□□ 0.51
RCCD1A6NED2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC003669.1-201ENST00000334569 611 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 KLF4P1-201ENST00000412782 1185 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC090616.6-201ENST00000582640 721 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC011467.2-201ENST00000598425 242 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC073592.5-201ENST00000624854 528 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AC148477.5-201ENST00000625164 1645 ntBASIC18.22■□□□□ 0.51
RCCD1A6NED2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RCCD1A6NED2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RCCD1A6NED2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 NUS1P1-201ENST00000446295 882 ntBASIC18.21■□□□□ 0.51
RCCD1A6NED2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 AC022188.1-201ENST00000620960 1664 ntBASIC18.21■□□□□ 0.51
RCCD1A6NED2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RCCD1A6NED2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
RCCD1A6NED2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
RCCD1A6NED2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
RCCD1A6NED2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RCCD1A6NED2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 AC024909.3-201ENST00000611513 2257 ntBASIC18.2■□□□□ 0.5
RCCD1A6NED2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms