Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PCDHA12-202ENST00000613593 2588 ntBASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 AC034105.1-201ENST00000563488 319 ntBASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL4A3BPQ9Y5P4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 AC022211.2-201ENST00000585075 2527 ntBASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL4A3BPQ9Y5P4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 SLC25A1P3-201ENST00000395415 828 ntBASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 LINC00982-205ENST00000420957 435 ntBASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 ACTG1P4-201ENST00000425123 1122 ntBASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 AC009053.2-201ENST00000563701 2365 ntBASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
COL4A3BPQ9Y5P4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 AC009947.1-201ENST00000444350 727 ntBASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 POLD2P1-201ENST00000511220 997 ntBASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL4A3BPQ9Y5P4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms