Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 SLC25A1P3-201ENST00000395415 828 ntBASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 ALG1L5P-201ENST00000482043 771 ntBASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 AC023141.13-201ENST00000604991 943 ntBASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 AL691403.2-201ENST00000618460 490 ntBASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCF1Q9UBD9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 YBX1P5-201ENST00000509441 847 ntBASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 AC107918.2-201ENST00000530817 355 ntBASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 C20orf181-201ENST00000623918 480 ntBASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 AC025580.3-201ENST00000617932 1424 ntBASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 CROCCP1-201ENST00000426910 5675 ntBASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLCF1Q9UBD9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 FZD10-202ENST00000539839 3282 ntBASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AC004967.1-201ENST00000453589 447 ntBASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 AC005829.1-201ENST00000570002 483 ntBASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCF1Q9UBD9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCF1Q9UBD9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CLCF1Q9UBD9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCF1Q9UBD9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.21■□□□□ 0.02
CLCF1Q9UBD9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCF1Q9UBD9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCF1Q9UBD9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms