Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 TSPY22P-201ENST00000427496 604 ntBASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 KRT18P57-201ENST00000443599 1254 ntBASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 STK19B-204ENST00000512515 211 ntBASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 STK25P1-201ENST00000585406 838 ntBASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 IGHV3-41-201ENST00000613121 348 ntBASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRCC1Q9NPI7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 AC092053.1-201ENST00000605787 1936 ntBASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 AC003669.1-201ENST00000334569 611 ntBASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 AC009533.2-201ENST00000543664 586 ntBASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 AL138831.2-201ENST00000606564 490 ntBASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.77■□□□□ 0.12
KRCC1Q9NPI7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.77■□□□□ 0.11
KRCC1Q9NPI7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 AL049757.1-201ENST00000616842 1596 ntBASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KRCC1Q9NPI7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms