Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 SLC22A20-204ENST00000530038 1673 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 SLC25A1P3-201ENST00000395415 828 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 RBPMS2P1-201ENST00000437762 623 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 DUX4L27-201ENST00000554796 1261 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 AL390955.2-201ENST00000603032 514 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 AL031055.1-201ENST00000606362 631 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.06■□□□□ 0.64
VTA1Q9NP79 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
VTA1Q9NP79 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTA1Q9NP79 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 PMS2P4-201ENST00000412466 1052 ntBASIC19.05■□□□□ 0.64
VTA1Q9NP79 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 AC087641.1-201ENST00000557561 1021 ntBASIC19.05■□□□□ 0.64
VTA1Q9NP79 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 AP001350.2-201ENST00000625104 1094 ntBASIC19.05■□□□□ 0.64
VTA1Q9NP79 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 AC093525.9-201ENST00000624961 1746 ntBASIC19.05■□□□□ 0.64
VTA1Q9NP79 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTA1Q9NP79 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.05■□□□□ 0.64
VTA1Q9NP79 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 RNA5SP421-201ENST00000516864 134 ntBASIC19.04■□□□□ 0.64
VTA1Q9NP79 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.04■□□□□ 0.64
VTA1Q9NP79 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTA1Q9NP79 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms