Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NCF1C-201ENST00000438382 1427 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.04■□□□□ -0
CDH20Q9HBT6 PRYP5-201ENST00000451909 266 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.04■□□□□ -0
CDH20Q9HBT6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.04■□□□□ -0
CDH20Q9HBT6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.04■□□□□ -0
CDH20Q9HBT6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 AC021087.4-201ENST00000563761 564 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.04■□□□□ -0
CDH20Q9HBT6 TP73-AS1-207ENST00000624167 988 ntBASIC15.04■□□□□ -0
CDH20Q9HBT6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.04■□□□□ -0
CDH20Q9HBT6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CDH20Q9HBT6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDH20Q9HBT6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.04■□□□□ -0
CDH20Q9HBT6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.04■□□□□ -0
CDH20Q9HBT6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH20Q9HBT6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.03■□□□□ -0
CDH20Q9HBT6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 AL160237.2-201ENST00000556165 472 ntBASIC15.03■□□□□ -0
CDH20Q9HBT6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.03■□□□□ -0
CDH20Q9HBT6 AC139887.3-201ENST00000568585 713 ntBASIC15.03■□□□□ -0
CDH20Q9HBT6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.03■□□□□ -0
CDH20Q9HBT6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.03■□□□□ -0
CDH20Q9HBT6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH20Q9HBT6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.02■□□□□ -0
CDH20Q9HBT6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.02■□□□□ -0
CDH20Q9HBT6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.02■□□□□ -0
CDH20Q9HBT6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH20Q9HBT6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.02■□□□□ -0
CDH20Q9HBT6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH20Q9HBT6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH20Q9HBT6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 KRT18P67-201ENST00000432816 1264 ntBASIC15.02■□□□□ -0
CDH20Q9HBT6 RNPS1P1-201ENST00000507437 918 ntBASIC15.02■□□□□ -0
CDH20Q9HBT6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 OR7E14P-202ENST00000530490 1290 ntBASIC15.02■□□□□ -0
CDH20Q9HBT6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.02■□□□□ -0
CDH20Q9HBT6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.02■□□□□ -0
CDH20Q9HBT6 AL121894.2-201ENST00000602977 491 ntBASIC15.02■□□□□ -0
CDH20Q9HBT6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CDH20Q9HBT6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 AL023806.1-201ENST00000603994 1649 ntBASIC15.02□□□□□ -0.01
CDH20Q9HBT6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH20Q9HBT6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms