Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 AC254562.1-201ENST00000417586 456 ntBASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 AC018845.2-201ENST00000568326 409 ntBASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 MIR4469-201ENST00000583919 79 ntBASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 AC011676.5-201ENST00000624864 2660 ntBASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP1Q9BWH6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RPAP1Q9BWH6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
RPAP1Q9BWH6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPAP1Q9BWH6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.77■□□□□ 0.91
RPAP1Q9BWH6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AL513190.1-201ENST00000621254 727 ntBASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 AC010507.1-201ENST00000633895 436 ntBASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP1Q9BWH6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AP002414.1-201ENST00000391405 1147 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 MRPL20P1-201ENST00000400819 433 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms