Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.71■□□□□ 0.27
PKP4Q99569 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.71■□□□□ 0.27
PKP4Q99569 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.71■□□□□ 0.27
PKP4Q99569 LAGE3P1-201ENST00000425356 484 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.71■□□□□ 0.27
PKP4Q99569 TPM4P1-201ENST00000436100 807 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 AC018712.1-201ENST00000455767 687 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PKP4Q99569 OR7E14P-202ENST00000530490 1290 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 AP002469.2-201ENST00000531724 424 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.71■□□□□ 0.27
PKP4Q99569 AL160237.2-201ENST00000556165 472 ntBASIC16.71■□□□□ 0.27
PKP4Q99569 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP4Q99569 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP4Q99569 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PKP4Q99569 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.71■□□□□ 0.27
PKP4Q99569 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PKP4Q99569 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP4Q99569 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PKP4Q99569 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PKP4Q99569 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.71■□□□□ 0.26
PKP4Q99569 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PKP4Q99569 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PKP4Q99569 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP4Q99569 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
PKP4Q99569 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 PRORSD1P-202ENST00000563365 2154 ntBASIC16.7■□□□□ 0.26
PKP4Q99569 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP4Q99569 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.7■□□□□ 0.26
PKP4Q99569 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 KRT18P67-201ENST00000432816 1264 ntBASIC16.7■□□□□ 0.26
PKP4Q99569 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.7■□□□□ 0.26
PKP4Q99569 AF186996.4-201ENST00000467186 377 ntBASIC16.7■□□□□ 0.26
PKP4Q99569 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.7■□□□□ 0.26
PKP4Q99569 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.7■□□□□ 0.26
PKP4Q99569 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP4Q99569 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 PCDHA12-202ENST00000613593 2588 ntBASIC16.7■□□□□ 0.26
PKP4Q99569 FRMD8P1-201ENST00000440433 1524 ntBASIC16.7■□□□□ 0.26
PKP4Q99569 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PKP4Q99569 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PKP4Q99569 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PKP4Q99569 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP4Q99569 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.69■□□□□ 0.26
PKP4Q99569 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 AC006504.4-201ENST00000592118 1568 ntBASIC16.69■□□□□ 0.26
PKP4Q99569 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PKP4Q99569 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PKP4Q99569 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.69■□□□□ 0.26
PKP4Q99569 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.69■□□□□ 0.26
PKP4Q99569 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.69■□□□□ 0.26
PKP4Q99569 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PKP4Q99569 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PKP4Q99569 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PKP4Q99569 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PKP4Q99569 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms