Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF20Q5VTR2 AC092068.3-201ENST00000587894 2016 ntBASIC20.49■□□□□ 0.87
RNF20Q5VTR2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 NKAPP1-205ENST00000585790 367 ntBASIC20.49■□□□□ 0.87
RNF20Q5VTR2 NCF1C-201ENST00000438382 1427 ntBASIC20.49■□□□□ 0.87
RNF20Q5VTR2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF20Q5VTR2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC005915.1-201ENST00000624912 2018 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC008608.2-201ENST00000606089 416 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 REXO1L6P-202ENST00000619970 1078 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC011676.5-201ENST00000624864 2660 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AC106886.4-201ENST00000623557 2502 ntBASIC20.48■□□□□ 0.87
RNF20Q5VTR2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF20Q5VTR2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RNF20Q5VTR2 AC099398.1-201ENST00000567919 2776 ntBASIC20.46■□□□□ 0.87
RNF20Q5VTR2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 SCARNA2-201ENST00000458748 420 ntBASIC20.46■□□□□ 0.87
RNF20Q5VTR2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF20Q5VTR2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms