Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 ZNF444P1-201ENST00000559497 298 ntBASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 GPR32P1-201ENST00000601788 811 ntBASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AL138966.2-201ENST00000621997 464 ntBASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC007950.2-201ENST00000615045 2347 ntBASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00242Q5T6M2 AC011270.2-201ENST00000624293 2550 ntBASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AC092364.2-201ENST00000596710 2692 ntBASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00242Q5T6M2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00242Q5T6M2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms