Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 AL138688.1-201ENST00000624851 1594 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 SLC25A1P3-201ENST00000395415 828 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 AP000344.2-201ENST00000512987 629 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 AC137695.1-201ENST00000604126 489 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 AC027612.4-201ENST00000605371 583 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 AC093525.9-201ENST00000624961 1746 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 AL035633.1-201ENST00000406139 838 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 MIR4515-201ENST00000584082 81 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 AL513210.1-201ENST00000629608 234 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 AC105339.1-204ENST00000636249 355 ntBASIC18.09■□□□□ 0.49
VARS2Q5ST30 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VARS2Q5ST30 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VARS2Q5ST30 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VARS2Q5ST30 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
VARS2Q5ST30 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 AC002056.1-201ENST00000395613 760 ntBASIC18.08■□□□□ 0.48
VARS2Q5ST30 AL645939.2-201ENST00000427340 991 ntBASIC18.08■□□□□ 0.48
VARS2Q5ST30 AC140658.5-201ENST00000438532 169 ntBASIC18.08■□□□□ 0.48
VARS2Q5ST30 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VARS2Q5ST30 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.08■□□□□ 0.48
VARS2Q5ST30 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms