Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDS5AQ29RF7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AC023141.5-201ENST00000458585 616 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AL135744.1-201ENST00000565098 629 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AC009093.7-201ENST00000623853 1223 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 TUBB8P12-201ENST00000308911 1335 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 TUBB7P-202ENST00000428444 1305 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 TUBB8P7-204ENST00000567960 1332 ntBASIC20.41■□□□□ 0.86
PDS5AQ29RF7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDS5AQ29RF7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AL139400.1-201ENST00000366220 510 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 TFAMP1-201ENST00000412727 736 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 TSEN15P1-201ENST00000423257 515 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AC243562.1-201ENST00000560672 389 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AC093520.2-201ENST00000561830 333 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AC027796.2-201ENST00000575326 344 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 AC067852.2-201ENST00000590513 2313 ntBASIC20.4■□□□□ 0.86
PDS5AQ29RF7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.4■□□□□ 0.86
PDS5AQ29RF7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.39■□□□□ 0.86
PDS5AQ29RF7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDS5AQ29RF7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
PDS5AQ29RF7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDS5AQ29RF7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 AL627223.1-201ENST00000416693 442 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SPDYE11-202ENST00000450699 704 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 HLA-J-203ENST00000494367 1087 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 RFPL4AP1-201ENST00000530883 850 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SPDYE9P-201ENST00000570642 692 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SPDYE10P-202ENST00000612005 668 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 SPDYE8P-202ENST00000612377 668 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 AC084121.4-201ENST00000641598 221 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 AF228730.8-201ENST00000642140 221 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms