Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.76■□□□□ 0.59
USP8P40818 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.76■□□□□ 0.59
USP8P40818 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
USP8P40818 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 NPAP1P7-201ENST00000613027 823 ntBASIC18.76■□□□□ 0.59
USP8P40818 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.76■□□□□ 0.59
USP8P40818 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.76■□□□□ 0.59
USP8P40818 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP8P40818 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
USP8P40818 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.76■□□□□ 0.59
USP8P40818 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP8P40818 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.75■□□□□ 0.59
USP8P40818 AC016396.2-201ENST00000562575 1417 ntBASIC18.75■□□□□ 0.59
USP8P40818 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 NKILA-202ENST00000614771 2598 ntBASIC18.75■□□□□ 0.59
USP8P40818 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.75■□□□□ 0.59
USP8P40818 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.75■□□□□ 0.59
USP8P40818 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP8P40818 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP8P40818 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
USP8P40818 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.75■□□□□ 0.59
USP8P40818 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.74■□□□□ 0.59
USP8P40818 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.74■□□□□ 0.59
USP8P40818 RCN1P2-201ENST00000398357 915 ntBASIC18.74■□□□□ 0.59
USP8P40818 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
USP8P40818 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.74■□□□□ 0.59
USP8P40818 IGHV3-47-201ENST00000425060 335 ntBASIC18.74■□□□□ 0.59
USP8P40818 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.74■□□□□ 0.59
USP8P40818 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 BNIP3P18-201ENST00000593976 575 ntBASIC18.74■□□□□ 0.59
USP8P40818 AC011467.2-201ENST00000598425 242 ntBASIC18.74■□□□□ 0.59
USP8P40818 AC099336.1-202ENST00000602961 463 ntBASIC18.74■□□□□ 0.59
USP8P40818 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 AC046185.3-201ENST00000623228 1824 ntBASIC18.74■□□□□ 0.59
USP8P40818 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP8P40818 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP8P40818 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
USP8P40818 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
USP8P40818 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP8P40818 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
USP8P40818 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms