Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 OR6D1P-203ENST00000641209 4860 ntBASIC17.31■□□□□ 0.36
VCLP18206 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
VCLP18206 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 AKR1C7P-201ENST00000305623 895 ntBASIC17.31■□□□□ 0.36
VCLP18206 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.31■□□□□ 0.36
VCLP18206 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
VCLP18206 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 MTDHP3-201ENST00000594186 672 ntBASIC17.31■□□□□ 0.36
VCLP18206 AC064862.7-201ENST00000604520 867 ntBASIC17.31■□□□□ 0.36
VCLP18206 AL355877.3-201ENST00000622820 899 ntBASIC17.31■□□□□ 0.36
VCLP18206 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VCLP18206 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
VCLP18206 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VCLP18206 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCLP18206 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
VCLP18206 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
VCLP18206 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VCLP18206 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 MYCLP1-201ENST00000372451 1075 ntBASIC17.3■□□□□ 0.36
VCLP18206 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.3■□□□□ 0.36
VCLP18206 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.3■□□□□ 0.36
VCLP18206 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 AL121894.2-201ENST00000602977 491 ntBASIC17.3■□□□□ 0.36
VCLP18206 AP001269.4-201ENST00000609611 512 ntBASIC17.3■□□□□ 0.36
VCLP18206 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
VCLP18206 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
VCLP18206 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VCLP18206 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCLP18206 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
VCLP18206 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.29■□□□□ 0.36
VCLP18206 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VCLP18206 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 AC002558.1-201ENST00000488906 803 ntBASIC17.29■□□□□ 0.36
VCLP18206 AF238378.1-201ENST00000526806 358 ntBASIC17.29■□□□□ 0.36
VCLP18206 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.29■□□□□ 0.36
VCLP18206 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VCLP18206 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VCLP18206 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
VCLP18206 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCLP18206 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VCLP18206 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms