Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 AL136379.1-201ENST00000623471 2642 ntBASIC18.6■□□□□ 0.57
CCDC172P0C7W6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 KRT18P21-201ENST00000515767 1272 ntBASIC18.6■□□□□ 0.57
CCDC172P0C7W6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 AC116407.4-201ENST00000623319 1061 ntBASIC18.6■□□□□ 0.57
CCDC172P0C7W6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC172P0C7W6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 EGFEM1P-202ENST00000431685 1563 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AC233702.3-201ENST00000578656 1387 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 KLF4P1-201ENST00000412782 1185 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 DRAXINP1-201ENST00000437611 948 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 MINOS1P3-201ENST00000457048 203 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AD001527.2-201ENST00000622994 785 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 AL590326.2-201ENST00000625139 305 ntBASIC18.59■□□□□ 0.57
CCDC172P0C7W6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC172P0C7W6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 TP73-AS1-210ENST00000637775 1455 ntBASIC18.58■□□□□ 0.57
CCDC172P0C7W6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
CCDC172P0C7W6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC172P0C7W6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms