Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.36■□□□□ 0.37
KDELR3O43731 OR6D1P-202ENST00000641007 5290 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 AC026471.1-201ENST00000564629 3026 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 AC007967.2-201ENST00000432613 625 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 KRT18P58-201ENST00000527480 1120 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.36■□□□□ 0.37
KDELR3O43731 AL671883.3-201ENST00000603274 991 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 AC140113.2-201ENST00000604370 208 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 AC064836.3-201ENST00000607928 673 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 REXO1L3P-201ENST00000622202 1288 ntBASIC17.36■□□□□ 0.37
KDELR3O43731 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KDELR3O43731 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KDELR3O43731 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
KDELR3O43731 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.36■□□□□ 0.37
KDELR3O43731 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KDELR3O43731 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
KDELR3O43731 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KDELR3O43731 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KDELR3O43731 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
KDELR3O43731 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.35■□□□□ 0.37
KDELR3O43731 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.35■□□□□ 0.37
KDELR3O43731 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KDELR3O43731 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KDELR3O43731 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.35■□□□□ 0.37
KDELR3O43731 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KDELR3O43731 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KDELR3O43731 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KDELR3O43731 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KDELR3O43731 IGLL3P-201ENST00000412472 434 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.34■□□□□ 0.37
KDELR3O43731 MED15P5-201ENST00000423150 992 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 PMS2P1-201ENST00000431037 1228 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.34■□□□□ 0.37
KDELR3O43731 KRT18P2-201ENST00000447938 1258 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 KRT18P3-201ENST00000451602 1288 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KDELR3O43731 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.34■□□□□ 0.37
KDELR3O43731 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.34■□□□□ 0.37
KDELR3O43731 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.34■□□□□ 0.37
KDELR3O43731 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 AL021920.2-201ENST00000624828 1351 ntBASIC17.34■□□□□ 0.37
KDELR3O43731 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KDELR3O43731 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KDELR3O43731 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
KDELR3O43731 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.33■□□□□ 0.37
KDELR3O43731 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KDELR3O43731 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KDELR3O43731 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.33■□□□□ 0.36
KDELR3O43731 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms