Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RN7SL832P-201ENST00000607781 1756 ntBASIC17.17■□□□□ 0.34
CFAP99D6REC4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CFAP99D6REC4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.17■□□□□ 0.34
CFAP99D6REC4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CFAP99D6REC4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CFAP99D6REC4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.17■□□□□ 0.34
CFAP99D6REC4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CFAP99D6REC4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFAP99D6REC4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CFAP99D6REC4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
CFAP99D6REC4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 AC073648.2-201ENST00000510116 352 ntBASIC17.16■□□□□ 0.34
CFAP99D6REC4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP99D6REC4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP99D6REC4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 SART3-203ENST00000546611 1184 ntBASIC17.15■□□□□ 0.34
CFAP99D6REC4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 AC097637.2-201ENST00000624096 1997 ntBASIC17.15■□□□□ 0.34
CFAP99D6REC4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP99D6REC4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 AC080080.1-201ENST00000625121 2420 ntBASIC17.15■□□□□ 0.34
CFAP99D6REC4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CFAP99D6REC4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CFAP99D6REC4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 NCF1C-201ENST00000438382 1427 ntBASIC17.14■□□□□ 0.33
CFAP99D6REC4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 ACTG1P4-201ENST00000425123 1122 ntBASIC17.14■□□□□ 0.33
CFAP99D6REC4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 AC018695.7-201ENST00000624587 2492 ntBASIC17.14■□□□□ 0.33
CFAP99D6REC4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms