Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC66A2RUB6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 AL138966.2-201ENST00000621997 464 ntBASIC18.67■□□□□ 0.58
CCDC66A2RUB6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 KRT8P47-201ENST00000604727 1398 ntBASIC18.67■□□□□ 0.58
CCDC66A2RUB6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC66A2RUB6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 AC024909.3-201ENST00000611513 2257 ntBASIC18.66■□□□□ 0.58
CCDC66A2RUB6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 AC073912.3-201ENST00000624414 853 ntBASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 C8orf49-201ENST00000525043 1968 ntBASIC18.66■□□□□ 0.58
CCDC66A2RUB6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC66A2RUB6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms