Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.46■□□□□ 0.38
TCRBV7S3A2A0A539 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV7S3A2A0A539 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.46■□□□□ 0.38
TCRBV7S3A2A0A539 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 DUX4L17-201ENST00000557360 1267 ntBASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 NPAP1P7-201ENST00000613027 823 ntBASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 AC114341.1-201ENST00000618070 349 ntBASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV7S3A2A0A539 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 AC006449.5-201ENST00000610658 2098 ntBASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 SPDYE21P-201ENST00000413323 827 ntBASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 AP000867.3-201ENST00000524675 377 ntBASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRBV7S3A2A0A539 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRBV7S3A2A0A539 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms