Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGB1Q9Y5G3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AL139327.4-201ENST00000612362 153 ntBASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 KRT89P-201ENST00000620027 1478 ntBASIC15.78■□□□□ 0.12
PCDHGB1Q9Y5G3 AC092384.3-202ENST00000564646 2873 ntBASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 KRT18P22-201ENST00000402024 1347 ntBASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 TERF1P1-201ENST00000311003 1181 ntBASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 AL390955.1-201ENST00000428694 934 ntBASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 AC128688.1-201ENST00000487626 519 ntBASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB1Q9Y5G3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB1Q9Y5G3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB1Q9Y5G3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB1Q9Y5G3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB1Q9Y5G3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB1Q9Y5G3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms