Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DOC2GP-204ENST00000639052 2548 ntBASIC16.24■□□□□ 0.19
RNF6Q9Y252 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 MINOS1P3-201ENST00000457048 203 ntBASIC16.24■□□□□ 0.19
RNF6Q9Y252 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 AC091607.1-201ENST00000490318 1060 ntBASIC16.24■□□□□ 0.19
RNF6Q9Y252 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 AC011840.4-201ENST00000578471 627 ntBASIC16.24■□□□□ 0.19
RNF6Q9Y252 LINC01451-201ENST00000623792 534 ntBASIC16.24■□□□□ 0.19
RNF6Q9Y252 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF6Q9Y252 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RNF6Q9Y252 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SAPCD2P3-201ENST00000455031 850 ntBASIC16.23■□□□□ 0.19
RNF6Q9Y252 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 FLJ38576-201ENST00000623820 2459 ntBASIC16.23■□□□□ 0.19
RNF6Q9Y252 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF6Q9Y252 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF6Q9Y252 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 AC022898.2-201ENST00000616822 1312 ntBASIC16.22■□□□□ 0.19
RNF6Q9Y252 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 REXO1L6P-202ENST00000619970 1078 ntBASIC16.22■□□□□ 0.19
RNF6Q9Y252 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF6Q9Y252 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF6Q9Y252 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms