Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TP73-AS1-207ENST00000624167 988 ntBASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 AC016396.2-201ENST00000562575 1417 ntBASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PPARGC1AQ9UBK2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 BX005266.1-201ENST00000473402 457 ntBASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PPARGC1AQ9UBK2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AL023806.1-201ENST00000603994 1649 ntBASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 FAM197Y8-203ENST00000450145 560 ntBASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AP002469.2-201ENST00000531724 424 ntBASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AC021087.4-201ENST00000563761 564 ntBASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 MTDHP4-201ENST00000600287 670 ntBASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PPARGC1AQ9UBK2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms