Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 SLC25A6P2-201ENST00000497974 877 ntBASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 AL513190.1-201ENST00000621254 727 ntBASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 AC010507.1-201ENST00000633895 436 ntBASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMG20BQ9P0W2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 AC116353.5-201ENST00000638148 1699 ntBASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMG20BQ9P0W2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 RPSAP43-201ENST00000402237 625 ntBASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 AC087163.2-201ENST00000457299 853 ntBASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 AC002347.1-201ENST00000569543 541 ntBASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 AC010327.4-202ENST00000591484 748 ntBASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HMG20BQ9P0W2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 GPX1P2-201ENST00000429271 606 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 RHOQP3-201ENST00000437982 621 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AC112482.1-201ENST00000492080 688 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AC096734.2-201ENST00000562054 433 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AC055717.3-201ENST00000622967 595 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 AP001094.4-201ENST00000579008 2176 ntBASIC20.84■□□□□ 0.93
HMG20BQ9P0W2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms