Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 RN7SL606P-201ENST00000472779 293 ntBASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AL592071.1-201ENST00000611956 408 ntBASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 IGHV3-41-201ENST00000613121 348 ntBASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHRDL1Q9BU40 AL596257.1-201ENST00000641463 2694 ntBASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHRDL1Q9BU40 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AL162727.3-201ENST00000635661 2787 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AC067930.6-201ENST00000623257 4947 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AC096633.1-201ENST00000422446 749 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 FAM86EP-206ENST00000510506 987 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 KRT8P26-201ENST00000534154 1276 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 CROCCP2-202ENST00000412962 2773 ntBASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHRDL1Q9BU40 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms