Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC27.99■■■□□ 2.07
IFT140Q96RY7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
IFT140Q96RY7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC27.99■■■□□ 2.07
IFT140Q96RY7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 CDK2AP2P3-201ENST00000422476 372 ntBASIC27.98■■■□□ 2.07
IFT140Q96RY7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 MNT-208ENST00000575394 606 ntTSL 4 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 5S_rRNA.22-201ENST00000614916 106 ntBASIC27.98■■■□□ 2.07
IFT140Q96RY7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC27.98■■■□□ 2.07
IFT140Q96RY7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
IFT140Q96RY7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
IFT140Q96RY7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 MPDU1-223ENST00000582151 728 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 CYP2A7P1-201ENST00000595391 815 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 SRD5A3P1-201ENST00000603021 949 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 MIR6869-201ENST00000619434 62 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
IFT140Q96RY7 REXO1L9P-201ENST00000604264 2108 ntBASIC27.97■■■□□ 2.07
IFT140Q96RY7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
IFT140Q96RY7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
IFT140Q96RY7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
IFT140Q96RY7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
IFT140Q96RY7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
IFT140Q96RY7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC27.96■■■□□ 2.07
IFT140Q96RY7 HAUS4P1-201ENST00000406739 1145 ntBASIC27.96■■■□□ 2.07
IFT140Q96RY7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.96■■■□□ 2.07
IFT140Q96RY7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC27.96■■■□□ 2.07
IFT140Q96RY7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 SLC9A3P2-201ENST00000447821 2021 ntBASIC27.96■■■□□ 2.07
IFT140Q96RY7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.96■■■□□ 2.07
IFT140Q96RY7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
IFT140Q96RY7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
IFT140Q96RY7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 MIR1908-201ENST00000410394 80 ntBASIC27.95■■■□□ 2.07
IFT140Q96RY7 AC098850.1-201ENST00000419919 790 ntBASIC27.95■■■□□ 2.07
IFT140Q96RY7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 MYCLP2-201ENST00000449268 967 ntBASIC27.95■■■□□ 2.07
IFT140Q96RY7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 CD74-212ENST00000524315 584 ntTSL 5 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 FLJ13224-201ENST00000313737 1514 ntBASIC27.95■■■□□ 2.07
IFT140Q96RY7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
IFT140Q96RY7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
IFT140Q96RY7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
IFT140Q96RY7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
IFT140Q96RY7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
IFT140Q96RY7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
IFT140Q96RY7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
IFT140Q96RY7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
IFT140Q96RY7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 CROCCP4-201ENST00000457096 498 ntBASIC27.95■■■□□ 2.06
IFT140Q96RY7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC27.95■■■□□ 2.06
IFT140Q96RY7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
IFT140Q96RY7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
IFT140Q96RY7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 USP32P1-208ENST00000506594 1164 ntBASIC27.94■■■□□ 2.06
IFT140Q96RY7 AC104989.1-201ENST00000519711 778 ntBASIC27.94■■■□□ 2.06
IFT140Q96RY7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC27.94■■■□□ 2.06
IFT140Q96RY7 AC023310.3-201ENST00000557027 670 ntBASIC27.94■■■□□ 2.06
IFT140Q96RY7 AC100756.1-201ENST00000562736 682 ntBASIC27.94■■■□□ 2.06
IFT140Q96RY7 AC138749.3-201ENST00000567691 622 ntBASIC27.94■■■□□ 2.06
IFT140Q96RY7 TMEM261P1-201ENST00000604899 340 ntBASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms