Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 SERBP1P3-201ENST00000459980 809 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ALG1L13P-202ENST00000519320 584 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 NDUFV2P1-201ENST00000596415 907 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FOXO1B-201ENST00000504678 1527 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC016700.1-201ENST00000429424 312 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PGAM1P5-201ENST00000548011 764 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AL133215.2-201ENST00000609242 977 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 NOC2LP1-202ENST00000452600 2235 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC092337.1-201ENST00000568699 1129 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC104982.3-201ENST00000581995 514 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC073389.1-201ENST00000595595 795 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AL096828.3-201ENST00000615354 462 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms