Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AL645929.1-201ENST00000420084 975 ntBASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 KRT18P57-201ENST00000443599 1254 ntBASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC092647.4-201ENST00000457211 535 ntBASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC44A1Q8WWI5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AC079328.2-201ENST00000561241 3354 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AC003669.1-201ENST00000334569 611 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AP002490.2-201ENST00000524791 560 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AC011840.4-201ENST00000578471 627 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 AC090616.6-201ENST00000582640 721 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC44A1Q8WWI5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 OR6D1P-203ENST00000641209 4860 ntBASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 AL162727.3-201ENST00000635661 2787 ntBASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 AL513523.2-202ENST00000427283 2040 ntBASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 RN7SL850P-201ENST00000579959 291 ntBASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 AD001527.2-201ENST00000622994 785 ntBASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms