Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 AL035633.1-201ENST00000406139 838 ntBASIC17.18■□□□□ 0.34
HMGB4Q8WW32 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 AC107918.2-201ENST00000530817 355 ntBASIC17.18■□□□□ 0.34
HMGB4Q8WW32 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 AC005498.2-205ENST00000593218 784 ntBASIC17.18■□□□□ 0.34
HMGB4Q8WW32 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 AC009093.7-201ENST00000623853 1223 ntBASIC17.18■□□□□ 0.34
HMGB4Q8WW32 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGB4Q8WW32 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC005332.8-201ENST00000622750 2735 ntBASIC17.17■□□□□ 0.34
HMGB4Q8WW32 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC092474.2-201ENST00000424288 719 ntBASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AL592309.1-201ENST00000443127 649 ntBASIC17.17■□□□□ 0.34
HMGB4Q8WW32 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGB4Q8WW32 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 Z92544.3-201ENST00000624747 417 ntBASIC17.16■□□□□ 0.34
HMGB4Q8WW32 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGB4Q8WW32 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms