Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HCG4B-203ENST00000450128 991 ntBASIC20.18■□□□□ 0.82
STAG1Q8WVM7 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.18■□□□□ 0.82
STAG1Q8WVM7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 IGLL3P-201ENST00000412472 434 ntBASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AC007967.2-201ENST00000432613 625 ntBASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 REXO1L3P-201ENST00000622202 1288 ntBASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.17■□□□□ 0.82
STAG1Q8WVM7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AC107918.2-201ENST00000530817 355 ntBASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AC092865.5-201ENST00000545435 363 ntBASIC20.16■□□□□ 0.82
STAG1Q8WVM7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
STAG1Q8WVM7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 CRYGEP-201ENST00000412192 528 ntBASIC20.15■□□□□ 0.82
STAG1Q8WVM7 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.15■□□□□ 0.82
STAG1Q8WVM7 BX842568.4-201ENST00000421222 227 ntBASIC20.15■□□□□ 0.82
STAG1Q8WVM7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 RNA5SP416-201ENST00000516838 111 ntBASIC20.15■□□□□ 0.82
STAG1Q8WVM7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
STAG1Q8WVM7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms