Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AC079776.4-201ENST00000511039 504 ntBASIC17.44■□□□□ 0.38
PTCD2Q8WV60 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AP000867.4-201ENST00000641616 219 ntBASIC17.44■□□□□ 0.38
PTCD2Q8WV60 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 PMPCAP1-201ENST00000508114 1576 ntBASIC17.44■□□□□ 0.38
PTCD2Q8WV60 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.43■□□□□ 0.38
PTCD2Q8WV60 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 RBM17P3-201ENST00000417687 1192 ntBASIC17.43■□□□□ 0.38
PTCD2Q8WV60 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 AC060834.1-201ENST00000443027 2032 ntBASIC17.43■□□□□ 0.38
PTCD2Q8WV60 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTCD2Q8WV60 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 AC018712.1-201ENST00000455767 687 ntBASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 RNPS1P1-201ENST00000507437 918 ntBASIC17.42■□□□□ 0.38
PTCD2Q8WV60 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PCDHA12-202ENST00000613593 2588 ntBASIC17.42■□□□□ 0.38
PTCD2Q8WV60 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCD2Q8WV60 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms