Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHDC9Q8NEP7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHDC9Q8NEP7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHDC9Q8NEP7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHDC9Q8NEP7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHDC9Q8NEP7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 ABALON-201ENST00000629058 1903 ntBASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 AC027369.6-201ENST00000525520 931 ntBASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 AL358472.5-202ENST00000641448 1267 ntBASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHDC9Q8NEP7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 NME2P1-201ENST00000426182 414 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 MEIS3P1-201ENST00000495167 958 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AL596325.1-201ENST00000563991 1082 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AC027307.3-201ENST00000594262 1100 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AC018529.1-201ENST00000613063 361 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 AC009118.2-201ENST00000613275 655 ntBASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
KLHDC9Q8NEP7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 EGFEM1P-202ENST00000431685 1563 ntBASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 MPDU1-223ENST00000582151 728 ntBASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KLHDC9Q8NEP7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KLHDC9Q8NEP7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms