Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 PTCHD3P3-201ENST00000403073 906 ntBASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 LINC00982-205ENST00000420957 435 ntBASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 AC004967.1-201ENST00000453589 447 ntBASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 MIR4751-201ENST00000578027 74 ntBASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 AC134684.3-201ENST00000641758 218 ntBASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PHTF2Q8N3S3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 AD000864.1-201ENST00000624076 2295 ntBASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
PHTF2Q8N3S3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 AC002310.6-201ENST00000624451 1377 ntBASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.77■□□□□ 0.43
PHTF2Q8N3S3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 MYCLP1-201ENST00000372451 1075 ntBASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 AC018845.2-201ENST00000568326 409 ntBASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 OR7E47P-204ENST00000575924 449 ntBASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.76■□□□□ 0.43
PHTF2Q8N3S3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHTF2Q8N3S3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHTF2Q8N3S3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.75■□□□□ 0.43
PHTF2Q8N3S3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHTF2Q8N3S3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHTF2Q8N3S3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms