Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC28Q86X40 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRC28Q86X40 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRRC28Q86X40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC28Q86X40 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 AL513523.2-202ENST00000427283 2040 ntBASIC15.34■□□□□ 0.05
LRRC28Q86X40 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 AC103702.1-201ENST00000548801 2630 ntBASIC15.34■□□□□ 0.05
LRRC28Q86X40 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRC28Q86X40 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRC28Q86X40 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRC28Q86X40 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRC28Q86X40 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC28Q86X40 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC28Q86X40 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.33■□□□□ 0.05
LRRC28Q86X40 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRC28Q86X40 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 BX276092.5-203ENST00000456199 560 ntBASIC15.33■□□□□ 0.04
LRRC28Q86X40 AP003733.1-201ENST00000491725 852 ntBASIC15.33■□□□□ 0.04
LRRC28Q86X40 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 AL121672.3-201ENST00000608644 468 ntBASIC15.33■□□□□ 0.04
LRRC28Q86X40 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC28Q86X40 KRT89P-201ENST00000620027 1478 ntBASIC15.33■□□□□ 0.04
LRRC28Q86X40 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 AC092068.3-201ENST00000587894 2016 ntBASIC15.33■□□□□ 0.04
LRRC28Q86X40 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC28Q86X40 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC28Q86X40 KRT8P26-201ENST00000534154 1276 ntBASIC15.32■□□□□ 0.04
LRRC28Q86X40 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.32■□□□□ 0.04
LRRC28Q86X40 AC008687.5-201ENST00000593746 558 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms