Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANKRD19P-201ENST00000338192 862 ntBASIC11.81□□□□□ -0.52
CSMD3Q7Z407 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 SPDYE18-201ENST00000510091 1050 ntBASIC11.81□□□□□ -0.52
CSMD3Q7Z407 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CSMD3Q7Z407 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 RPSAP52-203ENST00000622976 1023 ntBASIC11.8□□□□□ -0.52
CSMD3Q7Z407 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 BANF1P1-201ENST00000553684 263 ntBASIC11.8□□□□□ -0.52
CSMD3Q7Z407 MIR4515-201ENST00000584082 81 ntBASIC11.8□□□□□ -0.52
CSMD3Q7Z407 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 MYCLP1-201ENST00000372451 1075 ntBASIC11.8□□□□□ -0.52
CSMD3Q7Z407 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AC099568.2-201ENST00000609194 695 ntBASIC11.8□□□□□ -0.52
CSMD3Q7Z407 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.8□□□□□ -0.52
CSMD3Q7Z407 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 GPR182-203ENST00000622922 591 ntBASIC11.79□□□□□ -0.52
CSMD3Q7Z407 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 AC241585.1-201ENST00000433527 519 ntBASIC11.79□□□□□ -0.52
CSMD3Q7Z407 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.79□□□□□ -0.52
CSMD3Q7Z407 ZNF890P-202ENST00000530367 1156 ntBASIC11.79□□□□□ -0.52
CSMD3Q7Z407 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms