Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.08■□□□□ 0.32
NUBP1P53384 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 BLNK-209ENST00000495266 440 ntTSL 5 BASIC17.08■□□□□ 0.32
NUBP1P53384 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC17.08■□□□□ 0.32
NUBP1P53384 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.08■□□□□ 0.32
NUBP1P53384 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NUBP1P53384 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.08■□□□□ 0.32
NUBP1P53384 AC068620.4-201ENST00000636730 1182 ntBASIC17.08■□□□□ 0.32
NUBP1P53384 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUBP1P53384 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NUBP1P53384 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
NUBP1P53384 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.07■□□□□ 0.32
NUBP1P53384 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 AL035456.1-201ENST00000456064 1369 ntBASIC17.07■□□□□ 0.32
NUBP1P53384 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NUBP1P53384 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.07■□□□□ 0.32
NUBP1P53384 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUBP1P53384 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.07■□□□□ 0.32
NUBP1P53384 GCNT6-201ENST00000379591 934 ntBASIC17.07■□□□□ 0.32
NUBP1P53384 DGCR5-201ENST00000399539 862 ntBASIC17.07■□□□□ 0.32
NUBP1P53384 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.07■□□□□ 0.32
NUBP1P53384 MTCYBP11-201ENST00000447254 1109 ntBASIC17.07■□□□□ 0.32
NUBP1P53384 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC17.07■□□□□ 0.32
NUBP1P53384 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC17.07■□□□□ 0.32
NUBP1P53384 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NUBP1P53384 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NUBP1P53384 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC17.07■□□□□ 0.32
NUBP1P53384 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.07■□□□□ 0.32
NUBP1P53384 AC068587.10-201ENST00000641210 219 ntBASIC17.07■□□□□ 0.32
NUBP1P53384 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.07■□□□□ 0.32
NUBP1P53384 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.07■□□□□ 0.32
NUBP1P53384 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
NUBP1P53384 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUBP1P53384 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 AC131649.1-201ENST00000569215 1313 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 AC092933.1-201ENST00000393644 945 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 RANP7-201ENST00000418085 644 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.06■□□□□ 0.32
NUBP1P53384 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC17.06■□□□□ 0.32
NUBP1P53384 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.06■□□□□ 0.32
NUBP1P53384 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.06■□□□□ 0.32
NUBP1P53384 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NUBP1P53384 AC009039.2-201ENST00000624524 529 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 AL033527.4-201ENST00000641026 673 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 CDY3P-201ENST00000454543 1618 ntBASIC17.06■□□□□ 0.32
NUBP1P53384 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NUBP1P53384 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
NUBP1P53384 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUBP1P53384 BTBD7P1-201ENST00000447253 1453 ntBASIC17.05■□□□□ 0.32
NUBP1P53384 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.05■□□□□ 0.32
NUBP1P53384 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUBP1P53384 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUBP1P53384 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUBP1P53384 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.05■□□□□ 0.32
NUBP1P53384 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUBP1P53384 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
NUBP1P53384 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms