Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 MXI1-205ENST00000393134 889 ntTSL 2 BASIC30.05■■■□□ 2.4
SMARCA2P51531 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 AC093004.1-201ENST00000508850 424 ntBASIC30.05■■■□□ 2.4
SMARCA2P51531 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC30.05■■■□□ 2.4
SMARCA2P51531 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC30.05■■■□□ 2.4
SMARCA2P51531 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC30.05■■■□□ 2.4
SMARCA2P51531 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCA2P51531 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC30.05■■■□□ 2.4
SMARCA2P51531 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA2P51531 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC30.04■■■□□ 2.4
SMARCA2P51531 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA2P51531 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA2P51531 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA2P51531 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCA2P51531 AC007431.3-201ENST00000623221 587 ntBASIC30.04■■■□□ 2.4
SMARCA2P51531 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA2P51531 EGFEM1P-202ENST00000431685 1563 ntBASIC30.04■■■□□ 2.4
SMARCA2P51531 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA2P51531 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCA2P51531 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC30.04■■■□□ 2.4
SMARCA2P51531 BX323043.1-201ENST00000641006 1765 ntBASIC30.03■■■□□ 2.4
SMARCA2P51531 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA2P51531 MIR658-201ENST00000385210 100 ntBASIC30.03■■■□□ 2.4
SMARCA2P51531 SLC25A1P3-201ENST00000395415 828 ntBASIC30.03■■■□□ 2.4
SMARCA2P51531 AC135586.1-201ENST00000539323 574 ntBASIC30.03■■■□□ 2.4
SMARCA2P51531 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA2P51531 NAA38-206ENST00000576384 424 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA2P51531 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
SMARCA2P51531 TNXA-203ENST00000507684 2038 ntBASIC30.03■■■□□ 2.4
SMARCA2P51531 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA2P51531 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCA2P51531 RASL12-203ENST00000434605 982 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA2P51531 STARD13-205ENST00000439831 945 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA2P51531 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCA2P51531 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC30.03■■■□□ 2.4
SMARCA2P51531 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
SMARCA2P51531 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC30.02■■■□□ 2.4
SMARCA2P51531 CDK2AP2P3-201ENST00000422476 372 ntBASIC30.02■■■□□ 2.4
SMARCA2P51531 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
SMARCA2P51531 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 SPDYE18-201ENST00000510091 1050 ntBASIC30.02■■■□□ 2.4
SMARCA2P51531 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC30.02■■■□□ 2.4
SMARCA2P51531 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA2P51531 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCA2P51531 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC30.02■■■□□ 2.4
SMARCA2P51531 AC008494.3-201ENST00000606615 944 ntBASIC30.02■■■□□ 2.4
SMARCA2P51531 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC30.02■■■□□ 2.4
SMARCA2P51531 AP001350.2-201ENST00000625104 1094 ntBASIC30.02■■■□□ 2.4
SMARCA2P51531 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCA2P51531 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
SMARCA2P51531 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC30.02■■■□□ 2.4
SMARCA2P51531 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC30.01■■■□□ 2.4
SMARCA2P51531 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC30.01■■■□□ 2.4
SMARCA2P51531 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA2P51531 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA2P51531 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
SMARCA2P51531 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA2P51531 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCA2P51531 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC30.01■■■□□ 2.39
SMARCA2P51531 RN7SL837P-201ENST00000463010 287 ntBASIC30.01■■■□□ 2.39
SMARCA2P51531 KRT17P8-201ENST00000540749 863 ntBASIC30.01■■■□□ 2.39
SMARCA2P51531 CYP2A7P1-201ENST00000595391 815 ntBASIC30.01■■■□□ 2.39
SMARCA2P51531 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC30.01■■■□□ 2.39
SMARCA2P51531 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
SMARCA2P51531 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC30■■■□□ 2.39
SMARCA2P51531 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC30■■■□□ 2.39
SMARCA2P51531 SLC7A15P-201ENST00000424028 1363 ntBASIC30■■■□□ 2.39
SMARCA2P51531 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC30■■■□□ 2.39
SMARCA2P51531 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC30■■■□□ 2.39
SMARCA2P51531 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC30■■■□□ 2.39
SMARCA2P51531 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC30■■■□□ 2.39
SMARCA2P51531 KRT18P34-201ENST00000488218 1270 ntBASIC30■■■□□ 2.39
SMARCA2P51531 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SMARCA2P51531 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC30■■■□□ 2.39
SMARCA2P51531 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
SMARCA2P51531 RN7SL828P-201ENST00000607615 303 ntBASIC30■■■□□ 2.39
SMARCA2P51531 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMARCA2P51531 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC30■■■□□ 2.39
SMARCA2P51531 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SMARCA2P51531 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMARCA2P51531 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
SMARCA2P51531 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCA2P51531 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
SMARCA2P51531 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCA2P51531 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC29.99■■■□□ 2.39
SMARCA2P51531 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC29.99■■■□□ 2.39
SMARCA2P51531 AC092658.1-201ENST00000505836 891 ntBASIC29.99■■■□□ 2.39
SMARCA2P51531 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC29.99■■■□□ 2.39
SMARCA2P51531 AL589739.1-201ENST00000607720 493 ntBASIC29.99■■■□□ 2.39
SMARCA2P51531 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms