Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC011270.2-201ENST00000624293 2550 ntBASIC14.74□□□□□ -0.05
TNFSF4P23510 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF4P23510 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF4P23510 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF4P23510 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 ACTG1P4-201ENST00000425123 1122 ntBASIC14.73□□□□□ -0.05
TNFSF4P23510 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 RPS2P1-201ENST00000434010 821 ntBASIC14.73□□□□□ -0.05
TNFSF4P23510 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.73□□□□□ -0.05
TNFSF4P23510 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF4P23510 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF4P23510 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 AC025062.2-201ENST00000605477 670 ntBASIC14.73□□□□□ -0.05
TNFSF4P23510 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.73□□□□□ -0.05
TNFSF4P23510 AC107918.4-202ENST00000641623 219 ntBASIC14.73□□□□□ -0.05
TNFSF4P23510 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TNFSF4P23510 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TNFSF4P23510 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.73□□□□□ -0.05
TNFSF4P23510 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
TNFSF4P23510 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 AC004817.3-201ENST00000602957 2129 ntBASIC14.72□□□□□ -0.05
TNFSF4P23510 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 AL135999.2-201ENST00000622438 1686 ntBASIC14.72□□□□□ -0.05
TNFSF4P23510 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 AL031284.1-201ENST00000419297 478 ntBASIC14.72□□□□□ -0.05
TNFSF4P23510 AC018712.1-201ENST00000455767 687 ntBASIC14.72□□□□□ -0.05
TNFSF4P23510 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.72□□□□□ -0.05
TNFSF4P23510 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.72□□□□□ -0.05
TNFSF4P23510 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TNFSF4P23510 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.72□□□□□ -0.05
TNFSF4P23510 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TNFSF4P23510 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TNFSF4P23510 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
TNFSF4P23510 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TNFSF4P23510 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 LINC00982-205ENST00000420957 435 ntBASIC14.71□□□□□ -0.05
TNFSF4P23510 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.71□□□□□ -0.05
TNFSF4P23510 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TNFSF4P23510 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
TNFSF4P23510 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.71□□□□□ -0.05
TNFSF4P23510 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
TNFSF4P23510 AC008735.5-201ENST00000623544 497 ntBASIC14.71□□□□□ -0.05
TNFSF4P23510 PGM5P2-202ENST00000637225 1043 ntBASIC14.71□□□□□ -0.05
TNFSF4P23510 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TNFSF4P23510 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
TNFSF4P23510 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms