Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RFX1P22670 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX1P22670 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 STK19B-204ENST00000512515 211 ntBASIC18.73■□□□□ 0.59
RFX1P22670 PGAM5P1-201ENST00000518923 814 ntBASIC18.73■□□□□ 0.59
RFX1P22670 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 AC116407.3-201ENST00000623905 1129 ntBASIC18.73■□□□□ 0.59
RFX1P22670 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 AC104109.2-201ENST00000602919 1418 ntBASIC18.73■□□□□ 0.59
RFX1P22670 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFX1P22670 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX1P22670 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFX1P22670 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFX1P22670 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RFX1P22670 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
RFX1P22670 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 KLF4P1-201ENST00000412782 1185 ntBASIC18.72■□□□□ 0.59
RFX1P22670 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.72■□□□□ 0.59
RFX1P22670 PMS2P2-201ENST00000425039 1128 ntBASIC18.72■□□□□ 0.59
RFX1P22670 HMGN1P19-201ENST00000436976 333 ntBASIC18.72■□□□□ 0.59
RFX1P22670 AC124947.2-201ENST00000547118 1133 ntBASIC18.72■□□□□ 0.59
RFX1P22670 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.72■□□□□ 0.59
RFX1P22670 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.72■□□□□ 0.59
RFX1P22670 AL355877.3-201ENST00000622820 899 ntBASIC18.72■□□□□ 0.59
RFX1P22670 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.72■□□□□ 0.59
RFX1P22670 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RFX1P22670 FZD10-202ENST00000539839 3282 ntBASIC18.72■□□□□ 0.59
RFX1P22670 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.72■□□□□ 0.59
RFX1P22670 INTS4P1-201ENST00000438455 1935 ntBASIC18.72■□□□□ 0.59
RFX1P22670 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFX1P22670 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.72■□□□□ 0.59
RFX1P22670 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFX1P22670 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX1P22670 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX1P22670 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RFX1P22670 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 RBM17P3-201ENST00000417687 1192 ntBASIC18.71■□□□□ 0.59
RFX1P22670 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.71■□□□□ 0.59
RFX1P22670 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.71■□□□□ 0.59
RFX1P22670 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.71■□□□□ 0.59
RFX1P22670 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.71■□□□□ 0.59
RFX1P22670 AC132938.5-201ENST00000624980 1813 ntBASIC18.71■□□□□ 0.59
RFX1P22670 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.71■□□□□ 0.59
RFX1P22670 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFX1P22670 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms