Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH3P22223 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH3P22223 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH3P22223 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH3P22223 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDH3P22223 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 AL353593.2-201ENST00000602529 1483 ntBASIC16.91■□□□□ 0.3
CDH3P22223 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH3P22223 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
CDH3P22223 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH3P22223 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 NKILA-202ENST00000614771 2598 ntBASIC16.9■□□□□ 0.3
CDH3P22223 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDH3P22223 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH3P22223 KLF4P1-201ENST00000412782 1185 ntBASIC16.9■□□□□ 0.3
CDH3P22223 RPS2P1-201ENST00000434010 821 ntBASIC16.9■□□□□ 0.3
CDH3P22223 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH3P22223 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 MTDHP4-201ENST00000600287 670 ntBASIC16.9■□□□□ 0.3
CDH3P22223 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 AC019129.2-201ENST00000609837 1235 ntBASIC16.9■□□□□ 0.3
CDH3P22223 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH3P22223 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDH3P22223 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH3P22223 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH3P22223 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDH3P22223 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH3P22223 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH3P22223 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 AC011676.5-201ENST00000624864 2660 ntBASIC16.89■□□□□ 0.29
CDH3P22223 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CDH3P22223 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH3P22223 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH3P22223 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 OR7E14P-202ENST00000530490 1290 ntBASIC16.89■□□□□ 0.29
CDH3P22223 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH3P22223 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH3P22223 AC120114.3-201ENST00000611923 658 ntBASIC16.89■□□□□ 0.29
CDH3P22223 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CDH3P22223 AL022326.1-202ENST00000641533 845 ntBASIC16.89■□□□□ 0.29
CDH3P22223 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH3P22223 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH3P22223 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH3P22223 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.89■□□□□ 0.29
CDH3P22223 AC068418.2-201ENST00000577309 3703 ntBASIC16.89■□□□□ 0.29
CDH3P22223 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms