Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA1P21709 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA1P21709 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EPHA1P21709 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EPHA1P21709 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.79□□□□□ -0.04
EPHA1P21709 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA1P21709 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA1P21709 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
EPHA1P21709 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.79□□□□□ -0.04
EPHA1P21709 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA1P21709 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA1P21709 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA1P21709 KRT18P55-202ENST00000578578 1546 ntBASIC14.79□□□□□ -0.04
EPHA1P21709 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA1P21709 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EPHA1P21709 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
EPHA1P21709 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
EPHA1P21709 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA1P21709 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
EPHA1P21709 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
EPHA1P21709 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.78□□□□□ -0.04
EPHA1P21709 FAM197Y8-203ENST00000450145 560 ntBASIC14.78□□□□□ -0.04
EPHA1P21709 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA1P21709 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA1P21709 TP73-AS1-207ENST00000624167 988 ntBASIC14.78□□□□□ -0.04
EPHA1P21709 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA1P21709 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
EPHA1P21709 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA1P21709 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA1P21709 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA1P21709 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA1P21709 AC093010.1-201ENST00000473625 1624 ntBASIC14.77□□□□□ -0.04
EPHA1P21709 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
EPHA1P21709 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.77□□□□□ -0.04
EPHA1P21709 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA1P21709 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EPHA1P21709 AL355312.1-201ENST00000407115 2176 ntBASIC14.77□□□□□ -0.04
EPHA1P21709 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA1P21709 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA1P21709 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.77□□□□□ -0.05
EPHA1P21709 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms