Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THRAP10827 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THRAP10827 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THRAP10827 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THRAP10827 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
THRAP10827 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THRAP10827 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 AC022898.2-201ENST00000616822 1312 ntBASIC17.29■□□□□ 0.36
THRAP10827 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
THRAP10827 KRT18P67-201ENST00000432816 1264 ntBASIC17.29■□□□□ 0.36
THRAP10827 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.29■□□□□ 0.36
THRAP10827 RNA5SP419-201ENST00000515908 135 ntBASIC17.29■□□□□ 0.36
THRAP10827 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.29■□□□□ 0.36
THRAP10827 AP001005.1-201ENST00000571755 1248 ntBASIC17.29■□□□□ 0.36
THRAP10827 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.29■□□□□ 0.36
THRAP10827 AC120114.3-201ENST00000611923 658 ntBASIC17.29■□□□□ 0.36
THRAP10827 BX640515.1-201ENST00000617215 977 ntBASIC17.29■□□□□ 0.36
THRAP10827 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
THRAP10827 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
THRAP10827 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
THRAP10827 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THRAP10827 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THRAP10827 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 AC106886.4-201ENST00000623557 2502 ntBASIC17.28■□□□□ 0.36
THRAP10827 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
THRAP10827 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 AF186996.4-201ENST00000467186 377 ntBASIC17.28■□□□□ 0.36
THRAP10827 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.28■□□□□ 0.36
THRAP10827 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 LINC01451-201ENST00000623792 534 ntBASIC17.28■□□□□ 0.36
THRAP10827 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.28■□□□□ 0.36
THRAP10827 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 AC125634.1-201ENST00000438758 1403 ntBASIC17.28■□□□□ 0.36
THRAP10827 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 AL391005.1-201ENST00000623953 2435 ntBASIC17.28■□□□□ 0.36
THRAP10827 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
THRAP10827 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
THRAP10827 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THRAP10827 INTS4P1-201ENST00000438455 1935 ntBASIC17.27■□□□□ 0.36
THRAP10827 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
THRAP10827 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.27■□□□□ 0.36
THRAP10827 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.27■□□□□ 0.36
THRAP10827 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.27■□□□□ 0.36
THRAP10827 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.36
THRAP10827 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.27■□□□□ 0.36
THRAP10827 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
THRAP10827 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
THRAP10827 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THRAP10827 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THRAP10827 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms