Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
O00370 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
O00370 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
O00370 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
O00370 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.34■□□□□ 0.53
O00370 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
O00370 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
O00370 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.34■□□□□ 0.53
O00370 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.34■□□□□ 0.53
O00370 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
O00370 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.34■□□□□ 0.53
O00370 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.34■□□□□ 0.53
O00370 KRT18P67-201ENST00000432816 1264 ntBASIC18.34■□□□□ 0.53
O00370 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
O00370 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 AC073648.2-201ENST00000510116 352 ntBASIC18.34■□□□□ 0.53
O00370 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.34■□□□□ 0.53
O00370 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.34■□□□□ 0.53
O00370 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.34■□□□□ 0.53
O00370 AL121894.2-201ENST00000602977 491 ntBASIC18.34■□□□□ 0.53
O00370 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 AL589182.2-201ENST00000619332 1049 ntBASIC18.34■□□□□ 0.53
O00370 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
O00370 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.34■□□□□ 0.53
O00370 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
O00370 OR6D1P-202ENST00000641007 5290 ntBASIC18.34■□□□□ 0.53
O00370 AC060834.1-201ENST00000443027 2032 ntBASIC18.33■□□□□ 0.53
O00370 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.33■□□□□ 0.53
O00370 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
O00370 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
O00370 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
O00370 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
O00370 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.33■□□□□ 0.53
O00370 NCF1C-201ENST00000438382 1427 ntBASIC18.33■□□□□ 0.53
O00370 AL118508.1-201ENST00000613502 2345 ntBASIC18.33■□□□□ 0.53
O00370 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
O00370 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
O00370 AC011676.5-201ENST00000624864 2660 ntBASIC18.33■□□□□ 0.53
O00370 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
O00370 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.33■□□□□ 0.52
O00370 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.33■□□□□ 0.52
O00370 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
O00370 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.33■□□□□ 0.52
O00370 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
O00370 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.33■□□□□ 0.52
O00370 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.33■□□□□ 0.52
O00370 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
O00370 AL353135.1-201ENST00000606729 504 ntBASIC18.33■□□□□ 0.52
O00370 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
O00370 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
O00370 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
O00370 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
O00370 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.32■□□□□ 0.52
O00370 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 AL121761.2-201ENST00000598007 1648 ntBASIC18.32■□□□□ 0.52
O00370 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
O00370 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
O00370 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
O00370 RPS2P1-201ENST00000434010 821 ntBASIC18.32■□□□□ 0.52
O00370 HNRNPDP1-201ENST00000439535 754 ntBASIC18.32■□□□□ 0.52
O00370 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.32■□□□□ 0.52
O00370 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.32■□□□□ 0.52
O00370 AC148477.8-201ENST00000624298 468 ntBASIC18.32■□□□□ 0.52
O00370 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.32■□□□□ 0.52
O00370 AC107918.4-202ENST00000641623 219 ntBASIC18.32■□□□□ 0.52
O00370 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
O00370 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms